Transcript: ENSRNOT00000091227.3 Nr1h4-202

Description

nuclear receptor subfamily 1, group H, member 4 [Source:RGD Symbol;Acc:628831]

Gene Synonyms

Fxr, MGC94878

Location

About this transcript

This transcript has 9 exons, is annotated with 29 domains and features, is associated with 564 variant alleles and maps to 154 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000091227.3	Nr1h4-202	1798	512aa	ENSRNOP00000073765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6D2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000009910.6	Nr1h4-201	2081	473aa	ENSRNOP00000009910.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q4E9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,798 bps, Translation length: 512 residues

Version

ENSRNOT00000091227.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.