Transcript: ENSRNOT00000083658.3 Hoxa1-202

Description

homeobox A1 [Source:RGD Symbol;Acc:11414885]

Gene Synonyms

Hoxa1l, NEWGENE_2812

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 14 variant alleles and maps to 145 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000007807.4	Hoxa1-201	2219	334aa	ENSRNOP00000007807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K0P9 G3V6R3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000083658.3	Hoxa1-202	2016	136aa	ENSRNOP00000071447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0H5 A6K0Q0	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,016 bps, Translation length: 136 residues

Version

ENSRNOT00000083658.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.