Transcript: ENSRNOT00000005958.9 Pkhd1l1-201

Description

PKHD1 like 1 [Source:RGD Symbol;Acc:1310406]

Gene Synonyms

LOC314917, MGC124881

Location

About this transcript

This transcript has 78 exons, is annotated with 107 domains and features, is associated with 806 variant alleles and maps to 623 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005958.9	Pkhd1l1-201	12989	4244aa	ENSRNOP00000005958.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A9R2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000057146.7	Pkhd1l1-202	2834	748aa	ENSRNOP00000053974.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PSK6	-

Summary

Statistics

Exons: 78, Coding exons: 78, Transcript length: 12,989 bps, Translation length: 4,244 residues

Version

ENSRNOT00000005958.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.