Transcript: ENSRNOT00000005369.9 Nrde2-201

Description

NRDE-2, necessary for RNA interference, domain containing [Source:RGD Symbol;Acc:1565082]

Gene Synonyms

LOC314381, RGD1565082

Location

About this transcript

This transcript has 16 exons, is annotated with 21 domains and features, is associated with 313 variant alleles and maps to 162 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005369.9	Nrde2-201	4015	1218aa	ENSRNOP00000005369.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZDR9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000098050.2	Nrde2-202	4584	1186aa	ENSRNOP00000092173.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AG13	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 4,015 bps, Translation length: 1,218 residues

Version

ENSRNOT00000005369.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.