Transcript: ENSRNOT00000003070.7 Nup54-201

Description

nucleoporin 54 [Source:RGD Symbol;Acc:619926]

Location

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 106 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000155411.1	Nup54-203	2405	564aa	ENSRNOP00000106209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000003070.7	Nup54-201	2299	510aa	ENSRNOP00000003070.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KK71 P70582	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000118729.2	Nup54-202	2121	487aa	ENSRNOP00000081526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZV73	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,299 bps, Translation length: 510 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P70582

Version

ENSRNOT00000003070.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.