Transcript: ENSRNOT00000092322.3 Prrc2a-202

Description

proline-rich coiled-coil 2A [Source:RGD Symbol;Acc:1303025]

Gene Synonyms

Bat2

Location

Primary_assembly 20: 3,663,400-3,678,778 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 79 domains and features, is associated with 176 variant alleles and maps to 301 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000000852.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000120486.2	Prrc2a-203	6864	2178aa	ENSRNOP00000098146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000001133.8	Prrc2a-201	6816	2162aa	ENSRNOP00000001133.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2PZU5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000092322.3	Prrc2a-202	6603	2091aa	ENSRNOP00000075873.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RRZ5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 30, Coding exons: 29, Transcript length: 6,603 bps, Translation length: 2,091 residues

Version

ENSRNOT00000092322.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000092322.3 Prrc2a-202

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Transcript: ENSRNOT00000092322.3 Prrc2a-202

Summary

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