Transcript: ENSRNOT00000014028.7 Pex5-201

Description

peroxisomal biogenesis factor 5 [Source:RGD Symbol;Acc:1307612]

Gene Synonyms

LOC103690024, PTS1-BP, PTS1R

Location

About this transcript

This transcript has 16 exons, is annotated with 14 domains and features, is associated with 154 variant alleles and maps to 196 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000014028.7	Pex5-201	3281	641aa	ENSRNOP00000014028.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000071625.3	Pex5-202	3170	604aa	ENSRNOP00000064300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R4L3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 3,281 bps, Translation length: 641 residues

Version

ENSRNOT00000014028.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.