Transcript: ENSRNOT00000000549.6 Vps52-201

Description

VPS52 subunit of GARP complex [Source:RGD Symbol;Acc:3618]

Gene Synonyms

Are1, Sacm2l

Location

About this transcript

This transcript has 21 exons, is annotated with 5 domains and features, is associated with 257 variant alleles and maps to 275 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000000549.6	Vps52-201	3167	723aa	ENSRNOP00000000549.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GUV2 O55166	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000096948.1	Vps52-202	4505	722aa	ENSRNOP00000087040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A724	-
ENSRNOT00000107087.1	Vps52-203	3036	715aa	ENSRNOP00000080803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G757	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,167 bps, Translation length: 723 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O55166

Version

ENSRNOT00000000549.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.