Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene: Tex50 ENSRNOG00000038786

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Description

testis expressed 50 [Source:RGD Symbol;Acc:7711400]

Gene Synonyms

LOC102551559

Location

Primary_assembly 13: 75,964,492-75,972,136 reverse strand.

GRCr8:CM070403.1

About this gene

This gene has 3 transcripts (splice variants), 78 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000059261.4	Tex50-201	1092	189aa	ENSRNOP00000085488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GDW0 A6ID78	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000075844.3	Tex50-202	1049	181aa	ENSRNOP00000077295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y7D8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000168037.1	Tex50-203	801	162aa	ENSRNOP00000112709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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