Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Usp19 ENSRNOG00000049531

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Description

ubiquitin specific peptidase 19 [Source:RGD Symbol;Acc:1303276]

Location

Primary_assembly 8: 118,069,240-118,080,300 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 4 transcripts (splice variants), 201 orthologues, 50 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000074772.4	Usp19-201	4547	1359aa	ENSRNOP00000067744.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RDN9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000094044.2	Usp19-203	4650	1346aa	ENSRNOP00000090860.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AF46	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000085038.3	Usp19-202	4631	1322aa	ENSRNOP00000069554.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVN4 A6I360	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000119213.2	Usp19-204	4556	1297aa	ENSRNOP00000078495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMS3	-

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Summary

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