Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rcc1 ENSRNOG00000050106

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Description

regulator of chromosome condensation 1 [Source:RGD Symbol;Acc:1592835]

Gene Synonyms

LOC682908, MGC187541

Location

Primary_assembly 5: 149,810,689-149,828,523 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 5 transcripts (splice variants), 218 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000108589.2	Rcc1-204	1677	502aa	ENSRNOP00000091055.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEW5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000085482.3	Rcc1-202	2519	451aa	ENSRNOP00000074333.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K7T1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000101321.2	Rcc1-203	1743	466aa	ENSRNOP00000081871.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZU07	-
ENSRNOT00000075127.3	Rcc1-201	1630	434aa	ENSRNOP00000066003.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1H227	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000117781.2	Rcc1-205	1419	430aa	ENSRNOP00000079225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMN7	-

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Summary

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