Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Sri ENSRNOG00000049780

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Description

sorcin [Source:RGD Symbol;Acc:1584485]

Gene Synonyms

LOC683667, MGC188318

Location

Primary_assembly 4: 26,923,662-26,961,361 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 5 transcripts (splice variants), 170 orthologues, 18 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000167489.1	Sri-205	1908	235aa	ENSRNOP00000103006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000135492.1	Sri-204	1294	222aa	ENSRNOP00000103571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000112226.2	Sri-203	1157	211aa	ENSRNOP00000083569.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWU9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000094260.2	Sri-202	1133	203aa	ENSRNOP00000081785.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTT7 A0A8I6AU02	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000073790.4	Sri-201	1073	183aa	ENSRNOP00000066499.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RAF3	-

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Summary

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