Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tmc5 ENSRNOG00000036760

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Description

transmembrane channel-like 5 [Source:RGD Symbol;Acc:1307037]

Gene Synonyms

LOC365360

Location

Primary_assembly 1: 182,355,473-182,433,679 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 5 transcripts (splice variants), 213 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000096952.2	Tmc5-203	3593	965aa	ENSRNOP00000097174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5M7W4-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000155148.1	Tmc5-205	3497	933aa	ENSRNOP00000102910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000154983.1	Tmc5-204	3419	907aa	ENSRNOP00000100375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000055103.6	Tmc5-201	3018	758aa	ENSRNOP00000051978.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5M7W4-2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000065601.6	Tmc5-202	3016	953aa	ENSRNOP00000059631.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LRQ5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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