Summary
- Splice variants
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- Gene alleles
Sequence
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Comparative Genomics
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Gene: Rangap1 ENSRNOG00000031789

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Description

RAN GTPase activating protein 1 [Source:RGD Symbol;Acc:1310380]

Gene Synonyms

LOC362965

Location

Primary_assembly 7: 113,224,703-113,250,438 reverse strand.

mRatBN7.2:CM026980.1

About this gene

This gene has 4 transcripts (splice variants), 279 orthologues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000090208.2	Rangap1-202	2293	634aa	ENSRNOP00000073525.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K5R3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000052098.6	Rangap1-201	2738	584aa	ENSRNOP00000050029.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MAA5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000106829.1	Rangap1-203	2626	586aa	ENSRNOP00000094275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMS6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000107227.1	Rangap1-204	2590	574aa	ENSRNOP00000095665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GL89	-

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Summary

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