Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ddx5 ENSRNOG00000030680

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Description

DEAD-box helicase 5 [Source:RGD Symbol;Acc:619906]

Location

Primary_assembly 10: 91,723,508-91,732,283 reverse strand.

mRatBN7.2:CM026983.1

About this gene

This gene has 4 transcripts (splice variants), 277 orthologues, 44 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000098583.1	Ddx5-202	3325	617aa	ENSRNOP00000078427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKV9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000103418.1	Ddx5-203	3478	612aa	ENSRNOP00000084029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZYB4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000048490.3	Ddx5-201	2451	615aa	ENSRNOP00000041663.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AYI1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000116552.1	Ddx5-204	2138	478aa	ENSRNOP00000079189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G4Y3	-

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Summary

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