Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Chst5 ENSRNOG00000021521

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Description

carbohydrate sulfotransferase 5 [Source:RGD Symbol;Acc:1561144]

Gene Synonyms

LOC307859, RGD1561144

Location

Primary_assembly 19: 56,769,967-56,790,306 reverse strand.

GRCr8:CM070409.1

About this gene

This gene has 3 transcripts (splice variants), 199 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000026262.7	Chst5-201	2037	418aa	ENSRNOP00000026262.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IZB3 D4A9P8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000116386.2	Chst5-203	2380	395aa	ENSRNOP00000077730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GGK1 A6IZB4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000109790.2	Chst5-202	1953	395aa	ENSRNOP00000088767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GGK1 A6IZB4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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