Summary
- Splice variants
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Comparative Genomics
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Gene: Pdcd11 ENSRNOG00000020304

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Description

programmed cell death 11 [Source:RGD Symbol;Acc:1304933]

Gene Synonyms

LOC309458

Location

Primary_assembly 1: 255,922,225-255,963,336 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 204 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000027512.5	Pdcd11-201	6791	1877aa	ENSRNOP00000027512.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZNI3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000097870.2	Pdcd11-202	6542	1794aa	ENSRNOP00000089018.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AB17 A0A8I6AFK2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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