Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pde8a ENSRNOG00000019005

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Description

phosphodiesterase 8A [Source:RGD Symbol;Acc:735125]

Gene Synonyms

RNPDE8A

Location

Primary_assembly 1: 144,575,428-144,698,215 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 233 orthologues, 20 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000025797.5	Pde8a-201	2972	823aa	ENSRNOP00000025797.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q76KC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000096230.2	Pde8a-202	3059	820aa	ENSRNOP00000091374.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ABI0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000103564.2	Pde8a-204	2771	756aa	ENSRNOP00000083621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZXE4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000101888.2	Pde8a-203	2762	753aa	ENSRNOP00000078788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLP7	-

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Summary

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