leucine rich repeat and Ig domain containing 1 [Source:RGD Symbol;Acc:1308668]
LOC315691, Lrrn6a
Primary_assembly 8: 65,897,844-66,091,740 reverse strand.
GRCr8:CM070398.1
This gene has 10 transcripts (splice variants), 258 orthologues, 24 paralogues and is associated with 6 phenotypes.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSRNOT00000133656.1 | Lingo1-208 | 16601 | 614aa | ENSRNOP00000112140.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6J4R3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| ENSRNOT00000168236.1 | Lingo1-210 | 16509 | 614aa | ENSRNOP00000110189.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6J4R3 | - |
| ENSRNOT00000162113.1 | Lingo1-209 | 15666 | 614aa | ENSRNOP00000112698.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6J4R3 | - |
| ENSRNOT00000111614.2 | Lingo1-205 | 15063 | 614aa | ENSRNOP00000097278.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8I5ZPI2 A6J4R3 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSRNOT00000132165.1 | Lingo1-207 | 13919 | 614aa | ENSRNOP00000112849.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6J4R3 | - |
| ENSRNOT00000105816.2 | Lingo1-204 | 6992 | 614aa | ENSRNOP00000078102.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8I5ZPI2 A6J4R3 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSRNOT00000096263.2 | Lingo1-201 | 6904 | 614aa | ENSRNOP00000084606.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8I5ZPI2 A6J4R3 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSRNOT00000114132.2 | Lingo1-206 | 6877 | 614aa | ENSRNOP00000087521.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8I5ZPI2 A6J4R3 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSRNOT00000105281.2 | Lingo1-203 | 6857 | 614aa | ENSRNOP00000094597.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8I5ZPI2 A6J4R3 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSRNOT00000103010.2 | Lingo1-202 | 6450 | 614aa | ENSRNOP00000096831.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8I5ZPI2 A6J4R3 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
