Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pax2 ENSRNOG00000014253

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Description

paired box 2 [Source:RGD Symbol;Acc:1305568]

Gene Synonyms

LOC293992, Pax-2

Location

Primary_assembly 1: 253,555,418-253,645,438 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 254 orthologues, 44 paralogues and is associated with 21 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000138817.1	Pax2-204	2329	431aa	ENSRNOP00000105134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000129655.1	Pax2-203	2430	409aa	ENSRNOP00000104618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000085811.3	Pax2-202	1497	425aa	ENSRNOP00000070907.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JZ47	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000050076.6	Pax2-201	1430	388aa	ENSRNOP00000040130.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ACZ2	-

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Summary

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