Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Psmb6l1 ENSRNOG00000011827

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Description

proteasome 20S subunit beta 6 like 1 [Source:RGD Symbol;Acc:2321312]

Gene Synonyms

LOC100360846

Location

Primary_assembly 2: 95,739,530-95,745,156 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 4 transcripts (splice variants), 211 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000136369.1	Psmb6l1-203	1122	290aa	ENSRNOP00000099739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000171466.1	Psmb6l1-204	1128	272aa	ENSRNOP00000102100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000015746.5	Psmb6l1-201	785	238aa	ENSRNOP00000015747.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JSL0 A6IH77	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000121168.1	Psmb6l1-202	762	225aa	ENSRNOP00000102680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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