Gene: Vta1 ENSRNOG00000011540

Description

vesicle trafficking 1 [Source:RGD Symbol;Acc:1305031]

Gene Synonyms

LOC292640, Lip5, MGC112826, RGD1305031

Location

mRatBN7.2:CM026974.1

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and is associated with 2 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000096797.1	Vta1-203	1842	309aa	ENSRNOP00000088864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5Y0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000098320.1	Vta1-204	1618	243aa	ENSRNOP00000084084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZX91	-
ENSRNOT00000075850.3	Vta1-202	1228	287aa	ENSRNOP00000068514.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MKH2	-
ENSRNOT00000064836.2	Vta1-201	1212	251aa	ENSRNOP00000061074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4KM55	-

Summary