Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Casc3 ENSRNOG00000009716

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Description

CASC3 exon junction complex subunit [Source:RGD Symbol;Acc:628766]

Gene Synonyms

Btz, Mln51

Location

Primary_assembly 10: 84,265,033-84,286,637 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 4 transcripts (splice variants), 201 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000103824.2	Casc3-202	2175	724aa	ENSRNOP00000084172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G9Z5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000167464.1	Casc3-204	3920	704aa	ENSRNOP00000099110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000110187.2	Casc3-203	3618	666aa	ENSRNOP00000089096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAV4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000013204.6	Casc3-201	3538	637aa	ENSRNOP00000013204.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V793	-

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Summary

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