Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rin3 ENSRNOG00000007062

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Description

Ras and Rab interactor 3 [Source:RGD Symbol;Acc:1305849]

Location

Primary_assembly 6: 127,196,632-127,305,821 forward strand.

GRCr8:CM070396.1

About this gene

This gene has 6 transcripts (splice variants), 205 orthologues, 6 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000077477.3	Rin3-202	3682	984aa	ENSRNOP00000071441.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0G9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000065246.4	Rin3-201	3928	980aa	ENSRNOP00000062921.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZFZ0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000173556.1	Rin3-206	3854	975aa	ENSRNOP00000099321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000128787.1	Rin3-205	3723	925aa	ENSRNOP00000109761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000098291.2	Rin3-203	3715	969aa	ENSRNOP00000092596.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GJV5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000106338.2	Rin3-204	644	127aa	ENSRNOP00000083180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUY1	-

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Summary

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