Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Gpm6b ENSRNOG00000004613

.

Description

glycoprotein m6b [Source:RGD Symbol;Acc:620580]

Gene Synonyms

M6b

Location

Primary_assembly X: 31,690,359-31,733,272 reverse strand.

GRCr8:CM070411.1

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues, 2 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000086721.3	Gpm6b-202	2265	328aa	ENSRNOP00000070988.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JZB8 A6K2I7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000006777.7	Gpm6b-201	2166	305aa	ENSRNOP00000006777.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K2J0 E9PSV8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000118568.2	Gpm6b-203	2110	288aa	ENSRNOP00000090200.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9L3 A6K2I6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

.

Summary

.

.