Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tmem39a ENSRNOG00000003075

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Description

transmembrane protein 39a [Source:RGD Symbol;Acc:1306421]

Gene Synonyms

LOC288092, RGD1306421

Location

Primary_assembly 11: 75,666,154-75,695,486 reverse strand.

GRCr8:CM070401.1

About this gene

This gene has 2 transcripts (splice variants), 210 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000048738.6	Tmem39a-201	2050	497aa	ENSRNOP00000049087.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IR58 Q5U2V9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000167642.1	Tmem39a-202	1966	469aa	ENSRNOP00000105775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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