Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Snx4 ENSRNOG00000001786

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Description

sorting nexin 4 [Source:RGD Symbol;Acc:1309763]

Gene Synonyms

LOC360725

Location

Primary_assembly 11: 80,965,967-81,028,448 reverse strand.

GRCr8:CM070401.1

About this gene

This gene has 4 transcripts (splice variants), 258 orthologues, 15 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000105258.2	Snx4-202	1394	461aa	ENSRNOP00000088239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAD8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000002432.8	Snx4-201	2396	450aa	ENSRNOP00000002432.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PU13	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000171166.1	Snx4-204	2363	416aa	ENSRNOP00000099264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000144987.1	Snx4-203	2267	407aa	ENSRNOP00000111281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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