Gene: Snrnp48 ENSRNOG00000013756

Description

small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:RGD Symbol;Acc:1309020]

Gene Synonyms

LOC291060, RGD1309020

Location

mRatBN7.2:CM026990.1

About this gene

This gene has 2 transcripts (splice variants), 195 orthologues, 3 paralogues and is associated with 3 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110730.1	Snrnp48-202	3548	349aa	ENSRNOP00000085198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3E2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000018508.7	Snrnp48-201	1227	347aa	ENSRNOP00000018508.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZJA5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary