Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Snx11 ENSRNOG00000008642

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Description

sorting nexin 11 [Source:RGD Symbol;Acc:1307319]

Gene Synonyms

LOC303493

Location

Primary_assembly 10: 81,742,024-81,752,712 reverse strand.

mRatBN7.2:CM026983.1

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues, 16 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000081348.2	Snx11-202	2777	299aa	ENSRNOP00000070897.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JZ37	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000114616.1	Snx11-205	3805	287aa	ENSRNOP00000092915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AWA3	-
ENSRNOT00000096544.1	Snx11-204	3182	263aa	ENSRNOP00000077201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y9D6	-
ENSRNOT00000011474.7	Snx11-201	2496	270aa	ENSRNOP00000011474.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A3W4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000089146.2	Snx11-203	575	91aa	ENSRNOP00000070277.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXH9	-

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Summary

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