Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tmem200a ENSRNOG00000047783

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Description

transmembrane protein 200A [Source:RGD Symbol;Acc:1564024]

Gene Synonyms

LOC498987, RGD1564024

Location

Primary_assembly 1: 21,141,432-21,426,175 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 10 transcripts (splice variants), 201 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000070858.4	Tmem200a-201	4154	492aa	ENSRNOP00000066628.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z9K1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000132076.1	Tmem200a-205	11574	485aa	ENSRNOP00000101486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JPG3	-
ENSRNOT00000171694.1	Tmem200a-210	8809	485aa	ENSRNOP00000111263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JPG3	-
ENSRNOT00000117886.2	Tmem200a-204	6678	485aa	ENSRNOP00000080014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GGC7 A6JPG3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000133225.1	Tmem200a-206	5594	485aa	ENSRNOP00000104774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JPG3	-
ENSRNOT00000117712.2	Tmem200a-203	5582	485aa	ENSRNOP00000087765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GGC7 A6JPG3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000163107.1	Tmem200a-208	4113	485aa	ENSRNOP00000105918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JPG3	-
ENSRNOT00000111415.2	Tmem200a-202	4013	485aa	ENSRNOP00000081172.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZSF5 A6JPG3	-
ENSRNOT00000168778.1	Tmem200a-209	3753	485aa	ENSRNOP00000103898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JPG3	-
ENSRNOT00000154654.1	Tmem200a-207	3720	485aa	ENSRNOP00000101056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JPG3	-

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Summary

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