Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Znhit6 ENSRNOG00000030049

.

Description

zinc finger, HIT-type containing 6 [Source:RGD Symbol;Acc:1308723]

Gene Synonyms

LOC292160, RGD1308723

Location

Primary_assembly 2: 237,146,992-237,178,334 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 4 transcripts (splice variants) and 195 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000041897.5	Znhit6-201	1754	461aa	ENSRNOP00000041785.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1WC05 F7F2A4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000120282.2	Znhit6-204	1721	439aa	ENSRNOP00000089983.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GII8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000098863.2	Znhit6-202	1547	432aa	ENSRNOP00000092127.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGK2	-
ENSRNOT00000116542.2	Znhit6-203	1490	427aa	ENSRNOP00000082388.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZXU8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.