Gene: Paxip1 ENSRNOG00000007131

Description

PAX interacting protein 1 [Source:RGD Symbol;Acc:1307547]

Gene Synonyms

LOC311944

Location

Primary_assembly 4: 8,258,952-8,310,488 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 5 transcripts (splice variants), 211 orthologues, 1 paralogue and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000168947.1	Paxip1-205	3487	1119aa	ENSRNOP00000111583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000104160.2	Paxip1-203	4381	1083aa	ENSRNOP00000097277.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GMG2	-
ENSRNOT00000126337.1	Paxip1-204	3748	1067aa	ENSRNOP00000107761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000099077.2	Paxip1-202	3656	991aa	ENSRNOP00000081191.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZSF2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000009439.7	Paxip1-201	3481	1047aa	ENSRNOP00000009439.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZSX6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Gene: Paxip1 ENSRNOG00000007131

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Gene: Paxip1 ENSRNOG00000007131

Summary

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