Gene: Clec5a ENSRNOG00000026306

Description

C-type lectin domain containing 5A [Source:RGD Symbol;Acc:1584755]

Gene Synonyms

LOC679787

Location

GRCr8:CM070394.1

About this gene

This gene has 2 transcripts (splice variants), 220 orthologues, 58 paralogues and is associated with 4 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000033265.6	Clec5a-201	1394	190aa	ENSRNOP00000034438.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IEY3 D3ZPN6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000111357.2	Clec5a-202	1341	165aa	ENSRNOP00000086836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JTX6 A6IEY2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary