Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Best1 ENSRNOG00000020346

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Description

bestrophin 1 [Source:RGD Symbol;Acc:1311656]

Gene Synonyms

LOC293735, Vmd2

Location

Primary_assembly 1: 216,054,395-216,070,974 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 207 orthologues, 3 paralogues and is associated with 19 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000007320.7	Best1-201	2008	550aa	ENSRNOP00000007320.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AYG9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000100670.2	Best1-202	1929	508aa	ENSRNOP00000095084.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALZ3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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