Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ncl ENSRNOG00000018273

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Description

nucleolin [Source:RGD Symbol;Acc:3153]

Gene Synonyms

MGC93572

Location

Primary_assembly 9: 94,446,682-94,456,083 reverse strand.

GRCr8:CM070399.1

About this gene

This gene has 5 transcripts (splice variants), 125 orthologues, 35 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000159643.1	Ncl-205	2474	716aa	ENSRNOP00000108212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000024712.7	Ncl-201	3191	687aa	ENSRNOP00000024712.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JWG9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000118117.2	Ncl-204	2365	704aa	ENSRNOP00000076825.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y747	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000108022.2	Ncl-203	2233	702aa	ENSRNOP00000085040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A236	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000100834.2	Ncl-202	2233	702aa	ENSRNOP00000085305.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A206	-

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Summary

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