Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Scg2 ENSRNOG00000015055

.

Description

secretogranin II [Source:RGD Symbol;Acc:3626]

Gene Synonyms

Chcg, sgII

Location

Primary_assembly 9: 88,251,354-88,269,598 reverse strand.

GRCr8:CM070399.1

About this gene

This gene has 9 transcripts (splice variants), 250 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000167100.1	Scg2-208	5273	619aa	ENSRNOP00000099975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JW74	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000166173.1	Scg2-207	3280	619aa	ENSRNOP00000104795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JW74	-
ENSRNOT00000168776.1	Scg2-209	3278	619aa	ENSRNOP00000102163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JW74	-
ENSRNOT00000112421.2	Scg2-203	3080	619aa	ENSRNOP00000089801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A821 A6JW74	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000125596.1	Scg2-204	2919	619aa	ENSRNOP00000100352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JW74	-
ENSRNOT00000147411.1	Scg2-206	2762	619aa	ENSRNOP00000111363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JW74	-
ENSRNOT00000142296.1	Scg2-205	2627	619aa	ENSRNOP00000100467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JW74	-
ENSRNOT00000105728.2	Scg2-202	2476	619aa	ENSRNOP00000078659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A821 A6JW74	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000020219.5	Scg2-201	2285	579aa	ENSRNOP00000020219.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V7X2	-

.

Summary

.

.