Gene: Sall2 ENSRNOG00000013287

Description

spalt-like transcription factor 2 [Source:RGD Symbol;Acc:1309272]

Gene Synonyms

LOC305854

Location

mRatBN7.2:CM026988.1

About this gene

This gene has 2 transcripts (splice variants), 119 orthologues, 14 paralogues and is associated with 5 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000017730.6	Sall2-201	5186	1004aa	ENSRNOP00000017730.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ADE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000078180.2	Sall2-202	5003	1002aa	ENSRNOP00000073873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6M7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary