Gene: Chd5 ENSRNOG00000011268

Description

chromodomain helicase DNA binding protein 5 [Source:RGD Symbol;Acc:1582725]

Gene Synonyms

CHD-5, LOC691589

Location

Primary_assembly 5: 168,130,575-168,179,441 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 6 transcripts (splice variants), 170 orthologues, 31 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000024732.10	Chd5-201	7068	2069aa	ENSRNOP00000024732.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHP5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000170038.1	Chd5-206	7341	2046aa	ENSRNOP00000099286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000101172.2	Chd5-203	6921	1906aa	ENSRNOP00000084279.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZ60	-
ENSRNOT00000101697.2	Chd5-204	6425	1944aa	ENSRNOP00000086830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A737	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000112715.2	Chd5-205	6417	1911aa	ENSRNOP00000087017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A2F7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000067892.6	Chd5-202	6015	2004aa	ENSRNOP00000060241.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZR50	-

Gene: Chd5 ENSRNOG00000011268

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Gene: Chd5 ENSRNOG00000011268

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