Gene: Capns1 ENSRNOG00000067065

Description

calpain, small subunit 1 [Source:RGD Symbol;Acc:2270]

Gene Synonyms

CDPS, CSS1, Capn4, LOC100912380

Location

GRCr8:CM070391.1

About this gene

This gene has 5 transcripts (splice variants), 301 orthologues, 18 paralogues and is associated with 4 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000072756.3	Capns1-201	1576	349aa	ENSRNOP00000067513.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RD20	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000122480.1	Capns1-205	1637	346aa	ENSRNOP00000106268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000075236.4	Capns1-203	1365	260aa	ENSRNOP00000064672.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R5K3	-
ENSRNOT00000081362.3	Capns1-204	1330	255aa	ENSRNOP00000073819.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6H7	-
ENSRNOT00000074211.3	Capns1-202	1280	256aa	ENSRNOP00000064489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R533	-

Gene tree