Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Scamp1 ENSRNOG00000061582

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Description

secretory carrier membrane protein 1 [Source:RGD Symbol;Acc:3625]

Location

Primary_assembly 2: 27,168,864-27,251,742 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 5 transcripts (splice variants), 259 orthologues, 4 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000084044.3	Scamp1-201	3621	338aa	ENSRNOP00000070553.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JY82 P56603	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000115933.2	Scamp1-205	3718	312aa	ENSRNOP00000096839.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ARE5	-
ENSRNOT00000093847.2	Scamp1-203	3624	309aa	ENSRNOP00000086247.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1V6	-
ENSRNOT00000111881.2	Scamp1-204	3461	321aa	ENSRNOP00000087816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JY82	-
ENSRNOT00000084729.3	Scamp1-202	3434	312aa	ENSRNOP00000071856.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1I6	-

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Gene tree

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