Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Six5 ENSRNOG00000060146

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Description

SIX homeobox 5 [Source:RGD Symbol;Acc:1305040]

Gene Synonyms

LOC308406

Location

Primary_assembly 1: 87,869,405-87,873,929 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 257 orthologues, 5 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000084912.3	Six5-201	3619	720aa	ENSRNOP00000074243.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K7K3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000160619.1	Six5-202	3545	695aa	ENSRNOP00000104071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Gene tree

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