Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tnc ENSRNOG00000058645

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Description

tenascin C [Source:RGD Symbol;Acc:621057]

Location

Primary_assembly 5: 82,391,340-82,476,131 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 10 transcripts (splice variants), 193 orthologues, 23 paralogues and is associated with 38 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117346.2	Tnc-205	7551	2202aa	ENSRNOP00000096828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ARC1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000102414.2	Tnc-202	7278	2111aa	ENSRNOP00000089121.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GHT4	-
ENSRNOT00000173003.1	Tnc-210	7278	2111aa	ENSRNOP00000104214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000084563.3	Tnc-201	7275	2110aa	ENSRNOP00000071884.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1L0	-
ENSRNOT00000109041.2	Tnc-204	7002	2019aa	ENSRNOP00000091808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AG89	-
ENSRNOT00000170441.1	Tnc-209	6732	1929aa	ENSRNOP00000104830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000131055.1	Tnc-206	6729	1928aa	ENSRNOP00000110866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000134330.1	Tnc-208	6183	1746aa	ENSRNOP00000110404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000132029.1	Tnc-207	6183	1746aa	ENSRNOP00000107848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000107729.2	Tnc-203	5637	1564aa	ENSRNOP00000093442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AIS3	-

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Gene tree

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