Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: AABR07040864.1 ENSRNOG00000050960

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Description

autophagy related 4A, cysteine peptidase [Source:RGD Symbol;Acc:1596915]

Location

Primary_assembly X: 109,453,689-109,553,760 forward strand.

GRCr8:CM070411.1

About this gene

This gene has 3 transcripts (splice variants), 157 orthologues, 3 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000111607.2	AABR07040864.1-203	2151	410aa	ENSRNOP00000089027.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1H274	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000074776.4	AABR07040864.1-201	2264	399aa	ENSRNOP00000066137.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R9G9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000105654.2	AABR07040864.1-202	2069	380aa	ENSRNOP00000077804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZJL0	-

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Gene tree

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