Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tlr9 ENSRNOG00000048161

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Description

toll-like receptor 9 [Source:RGD Symbol;Acc:631352]

Location

Primary_assembly 8: 115,742,889-115,750,148 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 2 transcripts (splice variants), 82 orthologues, 24 paralogues and is associated with 73 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000074194.3	Tlr9-201	4472	1032aa	ENSRNOP00000066453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I2Q1 M0RAA8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000139422.1	Tlr9-202	5932	1014aa	ENSRNOP00000105050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Gene tree

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