Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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Ontologies
- GO: Anatomical entity
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Genetic Variation
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Gene: Tmem239 ENSRNOG00000047004

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Description

transmembrane 239 [Source:RGD Symbol;Acc:1592450]

Gene Synonyms

LOC100365450, LOC688109

Location

Primary_assembly 3: 138,053,765-138,063,665 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 5 transcripts (splice variants), 77 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000144979.1	Tmem239-204	9357	151aa	ENSRNOP00000108091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HQ88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000124496.1	Tmem239-202	6982	151aa	ENSRNOP00000098757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HQ88	-
ENSRNOT00000140470.1	Tmem239-203	6825	151aa	ENSRNOP00000105921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HQ88	-
ENSRNOT00000161139.1	Tmem239-205	6183	151aa	ENSRNOP00000100512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HQ88	-
ENSRNOT00000074724.4	Tmem239-201	5533	151aa	ENSRNOP00000064836.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HQ88 M0R5Z9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Gene tree

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