Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cdx2 ENSRNOG00000032759

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Description

caudal type homeo box 2 [Source:RGD Symbol;Acc:621234]

Location

Primary_assembly 12: 12,762,904-12,769,246 forward strand.

GRCr8:CM070402.1

About this gene

This gene has 1 transcript (splice variant), 129 orthologues, 2 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000048188.7	Cdx2-201	2049	310aa	ENSRNOP00000045045.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9K3Y7D3 Q9ESV7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Gene tree

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