Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: RT1-Bb ENSRNOG00000032708

.

Description

RT1 class II, locus Bb [Source:RGD Symbol;Acc:3469]

Gene Synonyms

Bb, MGC94124, RT1-B beta, RT1.B, RT1.B-BETA1, RT1.Bbeta

Location

Primary_assembly 20: 4,598,475-4,604,118 reverse strand.

GRCr8:CM070410.1

About this gene

This gene has 2 transcripts (splice variants), 138 orthologues, 11 paralogues and is associated with 134 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000000525.9	RT1-Bb-201	1517	263aa	ENSRNOP00000000525.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A023ILS1 F7EQR2 Q6AYB1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000082136.3	RT1-Bb-202	1182	174aa	ENSRNOP00000070172.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JX83	-

.

Gene tree

.

.