Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Hmgb1l1 ENSRNOG00000030351

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Description

high mobility group box 1 like 1 [Source:RGD Symbol;Acc:11444414]

Gene Synonyms

AABR07006627.1, LOC108348989

Location

Primary_assembly 1: 88,927,881-88,944,025 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 212 orthologues and 52 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000045504.6	Hmgb1l1-201	893	203aa	ENSRNOP00000085056.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A2H1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000147981.1	Hmgb1l1-202	835	177aa	ENSRNOP00000110077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Gene tree

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