Summary
- Splice variants
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- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene: Golgb1 ENSRNOG00000030314

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Description

golgin B1 [Source:RGD Symbol;Acc:708429]

Gene Synonyms

LOC192243

Location

Primary_assembly 11: 77,348,961-77,406,006 reverse strand.

GRCr8:CM070401.1

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000003255.6	Golgb1-201	10296	3228aa	ENSRNOP00000003255.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V6A8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000083152.3	Golgb1-202	10793	3166aa	ENSRNOP00000069873.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JWG6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000110978.2	Golgb1-203	10167	3185aa	ENSRNOP00000082110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUB6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Gene tree

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