Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Acan ENSRNOG00000028992

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Description

aggrecan [Source:RGD Symbol;Acc:68358]

Gene Synonyms

Agc, Agc1, CSPCP

Location

Primary_assembly 1: 142,390,951-142,453,779 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 302 orthologues, 7 paralogues and is associated with 29 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000047848.6	Acan-201	7728	2162aa	ENSRNOP00000042691.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A7Y1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000049681.8	Acan-202	7614	2124aa	ENSRNOP00000044130.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LQI4	-

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Gene tree

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